UoC crest

Publications 2018

  1. Phenotypes can be robust and evolvable if mutations have non-local effects on sequence constraints. M Weiß and SE Ahnert, J. Roy. Soc. Interface 15 20170618 (2018)
  2. Curvature by design and on demand in liquid crystal elastomers. BA Kowalski, C Mostajeran, NP Godman, M Warner and TJ White, Phys. Rev. E 97 012504 (2018)
  3. Effect of thermal nonlinearities on sideband asymmetry measurements in quantum optomechanics I Shomroni, L Qiu, M Ioannou, D Malz, A Nunnenkamp and TJ Kippenberg, Optics InfoBase Conference Papers Part F93-CLEO_QELS 2018 (2018)
  4. An: Ab initio investigation on the electronic structure, defect energetics, and magnesium kinetics in Mg<inf>3</inf>Bi<inf>2</inf> J Lee, B Monserrat, ID Seymour, Z Liu, SE Dutton and CP Grey, J. Mater. Chem. A Mater. Energy Sustain. 6 16983 - 16991 (2018)
  5. Biomolecular simulations: From dynamics and mechanisms to computational assays of biological activity DJ Huggins et al., W.I.Res. Comput. Mol. Sci. e1393 (2018)
  6. Muscle Stem Cells Exhibit Distinct Clonal Dynamics in Response to Tissue Repair and Homeostatic Aging. MT Tierney, MJ Stec, S Rulands, BD Simons and A Sacco, Cell Stem Cell 22 119 - 127.e3 (2018)
  7. Multiparticle instability in a spin-imbalanced Fermi gas TM Whitehead and GJ Conduit, Phys. Rev. B 97 014502 (2018)
  8. Ground state structure of high-energy-density polymeric carbon monoxide (vol 95, 144102, 2017) K Xia, J Sun, CJ Pickard, DD Klug and RJ Needs, Phys. Rev. B 97 019902 (2018)
  9. Quantum-Limited Directional Amplifiers with Optomechanics D Malz, LD Toth, NR Bernier, AK Feofanov, TJ Kippenberg and A Nunnenkamp, Phys. Rev. Lett. 120 023601 (2018)
  10. Harmonic Force Constants for Molecular Mechanics Force Fields via Hessian Matrix Projection. AEA Allen, MC Payne and DJ Cole, J. Chem. Theory Comput. 14 274 - 281 (2018)
  11. Troy+ brain stem cells cycle through quiescence and regulate their number by sensing niche occupancy. O Basak et al., P. Natl Acad. Sci. USA 115 E610 - E619 (2018)
  12. Dynamic scaling of topological ordering in classical systems N Xu, C Castelnovo, RG Melko, C Chamon and AW Sandvik, Phys. Rev. B 97 024432 (2018)
  13. Stability of fractional Chern insulators in the effective continuum limit of Harper-Hofstadter bands with Chern number vertical bar C vertical bar > 1 B Andrews and G Moller, Phys. Rev. B 97 035159 (2018)
  14. Defining murine organogenesis at single-cell resolution reveals a role for the leukotriene pathway in regulating blood progenitor formation. X Ibarra-Soria et al., Nat. Cell Biol. 20 127 - 134 (2018)
  15. Nematic director fields and topographies of solid shells of revolution. M Warner and C Mostajeran, Proc. Royal Soc. A - Math. Phy. 474 20170566 (2018)
  16. Anomalous diffusion in a dynamical optical lattice W Zheng and NR Cooper, Phys. Rev. A 97 021601 (2018)
  17. Live imaging of neurogenesis in the adult mouse hippocampus. G-A Pilz, S Bottes, M Betizeau, DJ Jörg, S Carta, BD Simons, F Helmchen and S Jessberger, Science 359 658 - 662 (2018)
  18. Stochastic sampling of quadrature grids for the evaluation of vibrational expectation values P López Ríos, B Monserrat and RJ Needs, Phys. Rev. B 97 054104 (2018)
  19. Dephasing with strings attached C Castelnovo, MI Dykman, VN Smelyanskiy, R Moessner and LP Pryadko, Phys. Rev. B 97 085121 (2018)
  20. First-principles momentum distributions and vibrationally corrected permittivities of hexagonal and cubic ice EA Engel, Y Li and RJ Needs, Phys. Rev. B 97 054312 (2018)
  21. Noisy Spins and the Richardson-Gaudin Model DA Rowlands and A Lamacraft, Phys. Rev. Lett. 120 090401 (2018)
  22. Electron-phonon coupling from finite differences. B Monserrat, J. Phys. - Condens. Mat. 30 083001 (2018)
  23. Coherence effects in disordered geometries with a field-theory dual T Andrade, AM García-García and B Loureiro, J. High Energy Phys. 2018 (2018)
  24. Quantum Order-by-Disorder in Strongly Correlated Metals AG Green, G Conduit and F Krüger, Annual Review of Cond. Matt. Physics 9 59 - 77 (2018)
  25. Physics of the Kitaev model: fractionalization, dynamical correlations, and material connections M Hermanns, I Kimchi and J Knolle, Annual Review of Cond. Matt. Physics 9 17 - 33 (2018)
  26. Probabilistic design of a molybdenum-base alloy using a neural network BD Conduit, NG Jones, HJ Stone and GJ Conduit, Scripta Mater. 146 82 - 86 (2018)
  27. Chemical event chain model of coupled genetic oscillators DJ Jörg, LG Morelli and F Jülicher, Phys. Rev. E 97 032409 (2018)
  28. Tuning the relaxation dynamics of ultracold atoms in a lattice with an optical cavity EI Rodríguez Chiacchio and A Nunnenkamp, Phys. Rev. A 97 033618 (2018)
  29. Phonon-assisted optical absorption in BaSnO3 from first principles B Monserrat, CE Dreyer and KM Rabe, Phys. Rev. B 97 104310 (2018)
  30. Strong coupling superconductivity in a quasiperiodic host-guest structure. P Brown, K Semeniuk, D Wang, B Monserrat, CJ Pickard and FM Grosche, Science Advances 4 eaao4793 (2018)
  31. C2x: A tool for visualisation and input preparation for CASTEP and other electronic structure codes MJ Rutter, Comput. Phys. Commun. 225 174 - 179 (2018)
  32. A Gene Regulatory Network for Cellular Reprogramming in Plant Regeneration. M Ikeuchi et al., Plant Cell Physiol. 59 765 - 777 (2018)
  33. Semiclassical dynamics, Berry curvature, and spiral holonomy in optical quasicrystals S Spurrier and NR Cooper, Phys. Rev. A 97 043603 (2018)
  34. Experimental and Theoretical Investigation of Structures, Stoichiometric Diversity, and Bench Stability of Cocrystals with a Volatile Halogen Bond Donor K Lisac, V Nemec, F Topić, M Arhangelskis, P Hindle, R Tran, I Huskić, AJ Morris, T Friščić and D Cinčić, Cryst. Growth Des. 18 2387 - 2396 (2018)
  35. Computational evaluation of metal pentazolate frameworks: inorganic analogues of azolate metal-organic frameworks. M Arhangelskis, AD Katsenis, AJ Morris and T Friščić, Chem. Sci. 9 3367 - 3375 (2018)
  36. Infinite lattices of vortex molecules in Rabi-coupled condensates B Mencia Uranga and A Lamacraft, Phys. Rev. A 97 043609 (2018)
  37. Entanglement negativity and sudden death in the toric code at finite temperature O Hart and C Castelnovo, Phys. Rev. B 97 144410 (2018)
  38. Integrin α2 marks a niche of trophoblast progenitor cells in first trimester human placenta. CQE Lee, MY Turco, L Gardner, BD Simons, M Hemberger and A Moffett, Development 145 (2018)
  39. Evidence from Quantum Monte Carlo Simulations of Large-Gap Superfluidity and BCS-BEC Crossover in Double Electron-Hole Layers. P López Ríos, A Perali, RJ Needs and D Neilson, Phys. Rev. Lett. 120 177701 (2018)
  40. Current rectification in a double quantum dot through fermionic reservoir engineering D Malz and A Nunnenkamp, Phys. Rev. B 97 165308 (2018)
  41. Universality of clone dynamics during tissue development. S Rulands, F Lescroart, S Chabab, CJ Hindley, N Prior, MK Sznurkowska, M Huch, A Philpott, C Blanpain and BD Simons, Nat. Phys. 14 469 - 474 (2018)
  42. Predominant Asymmetrical Stem Cell Fate Outcome Limits the Rate of Niche Succession in Human Colonic Crypts. C Stamp et al., EBioMedicine 31 166 - 173 (2018)
  43. Universality of clone dynamics during tissue development (vol 14, pg 469, 2018) S Rulands, F Lescroart, S Chabab, CJ Hindley, N Prior, MK Sznurkowska, M Huch, A Philpott, C Blanpain and BD Simons, Nat. Phys. 14 523 (2018)
  44. Materials data validation and imputation with an artificial neural network PC Verpoort, P MacDonald and GJ Conduit, Comp. Mater. Sci. 147 176 - 185 (2018)
  45. Role of electron-phonon coupling and thermal expansion on band gaps, carrier mobility, and interfacial offsets in kesterite thin-film solar cells B Monserrat, JS Park, S Kim and A Walsh, Appl. Phys. Lett. 112 193903 (2018)
  46. The developmental origin of brain tumours: a cellular and molecular framework. R Azzarelli, BD Simons and A Philpott, Development 145 (2018)
  47. Phases of driven two-level systems with nonlocal dissipation CD Parmee and NR Cooper, Phys. Rev. A 97 053616 (2018)
  48. Phases of driven two-level systems with nonlocal dissipation CD Parmee and NR Cooper, Phys. Rev. A 97 053616 (2018)
  49. Electronic Structure Control of Sub-nanometer 1D SnTe via Nanostructuring within Single-Walled Carbon Nanotubes. A Vasylenko, S Marks, JM Wynn, PVC Medeiros, QM Ramasse, AJ Morris, J Sloan and D Quigley, ACS Nano 12 6023 - 6031 (2018)
  50. Quantitative metrics for drug-target ligandability. S Vukovic and DJ Huggins, Drug Discov. Today 23 1258 - 1266 (2018)
  51. Clonal analysis of Notch1-expressing cells reveals the existence of unipotent stem cells that retain long-term plasticity in the embryonic mammary gland. AM Lilja, V Rodilla, M Huyghe, E Hannezo, C Landragin, O Renaud, O Leroy, S Rulands, BD Simons and S Fre, Nat. Cell Biol. 20 677 - 687 (2018)
  52. Bulk properties and near-critical behaviour of SiO<inf>2</inf>fluid ECR Green, E Artacho and JAD Connolly, Earth Planet Sci. Lett. 491 11 - 20 (2018)
  53. Mapping uncharted territory in ice from zeolite networks to ice structures. EA Engel, A Anelli, M Ceriotti, CJ Pickard and RJ Needs, Nature Comm. 9 2173 (2018)
  54. Photophysics and Photochemistry of DNA Molecules: Electronic Excited States Leading to Thymine Dimerization J-H Li, TJ Zuehlsdorff, MC Payne and NDM Hine, J. Phys. Chem. C 122 11633 - 11640 (2018)
  55. Quantized Rabi oscillations and circular dichroism in quantum Hall systems DT Tran, NR Cooper and N Goldman, Phys. Rev. A 97 061602 (2018)
  56. Estimating Atomic Contributions to Hydration and Binding Using Free Energy Perturbation. BWJ Irwin and DJ Huggins, J. Chem. Theory Comput. 14 3218 - 3227 (2018)
  57. Magnesium Nanoparticle Plasmonics. JS Biggins, S Yazdi and E Ringe, Nano Lett. 18 3752 - 3758 (2018)
  58. Chaotic-Integrable Transition in the Sachdev-Ye-Kitaev Model AM García-García, B Loureiro, A Romero-Bermúdez and M Tezuka, Phys. Rev. Lett. 120 (2018)
  59. Structure and Metallicity of Phase v of Hydrogen B Monserrat, ND Drummond, P Dalladay-Simpson, RT Howie, P López Ríos, E Gregoryanz, CJ Pickard and RJ Needs, Phys. Rev. Lett. 120 255701 (2018)
  60. Dynamical localization in Z(2) lattice gauge theories A Smith, J Knolle, R Moessner and DL Kovrizhin, Phys. Rev. B 97 245137 (2018)
  61. Sodiation and Desodiation via Helical Phosphorus Intermediates in High-Capacity Anodes for Sodium-Ion Batteries. LE Marbella, ML Evans, MF Groh, J Nelson, KJ Griffith, AJ Morris and CP Grey, J. Am. Chem. Soc. 140 7994 - 8004 (2018)
  62. Synthetic gauge fields for lattices with multi-orbital unit cells: Routes towards a π-flux dice lattice with flat bands G Möller and NR Cooper, New J. Phys. 20 073025 (2018)
  63. Endoscopic ultrasound-guided choledochoduodenostomy using a lumen apposing metal stent for acute cholangitis V Sandru, M Ilie, O Plotogea, BS Ungureanu, A Stoica, DI Gheonea and G Constantinescu, Turk. J. Gastroenterol. 29 511 - 514 (2018)
  64. Color-dependent interactions in the three coloring model PC Verpoort, J Simmons and C Castelnovo, Phys. Rev. B 98 024403 (2018)
  65. Helium-Iron Compounds at Terapascal Pressures. B Monserrat, M Martinez-Canales, RJ Needs and CJ Pickard, Phys. Rev. Lett. 121 015301 (2018)
  66. Theory of the Josephson Junction Laser. SH Simon and NR Cooper, Phys. Rev. Lett. 121 027004 (2018)
  67. Mechanical architecture and folding of E. coli type 1 pilus domains. A Alonso-Caballero, J Schönfelder, S Poly, F Corsetti, D De Sancho, E Artacho and R Perez-Jimenez, Nature Comm. 9 2758 (2018)
  68. Genome-Scale Oscillations in DNA Methylation during Exit from Pluripotency. S Rulands et al., Cell Systems 7 63 - 76.e12 (2018)
  69. Non-deterministic genotype-phenotype maps of biological self-assembly<sup>(a)</sup> S Tesoro and SE Ahnert, Europhys. Lett. 123 38002 (2018)
  70. Phases of quantum dimers from ensembles of classical stochastic trajectories T Oakes, S Powell, C Castelnovo, A Lamacraft and JP Garrahan, Phys. Rev. B 98 064302 (2018)
  71. Defining Lineage Potential and Fate Behavior of Precursors during Pancreas Development. MK Sznurkowska et al., Dev. Cell 46 360 - 375.e5 (2018)
  72. Effect of Thermal Nonlinearities on Sideband Asymmetry Measurements in Quantum Optomechanics I Shomroni, L Qiu, M Ioannou, D Malz, A Nunnenkamp and TJ Kippenberg, 2018 Conference on Lasers and Electro-Optics, CLEO 2018 - Proceedings (2018)
  73. Determinism and boundedness of self-assembling structures S Tesoro, SE Ahnert and AS Leonard, Phys. Rev. E 98 022113 (2018)
  74. Erratum: Structure Prediction of Li-Sn and Li-Sb Intermetallics for Lithium-Ion Batteries Anodes (Chemistry of Materials (2017) 29:14 (5787?5795) DOI: 10.1021/acs.chemmater.6b04914) M Mayo, JP Darby, ML Evans, JR Nelson and AJ Morris, Chem. Mater. 30 5516 - 5517 (2018)
  75. Emergence of continuous rotational symmetries in ultracold atoms coupled to optical cavities EIR Chiacchio and A Nunnenkamp, Phys. Rev. A 98 023617 (2018)
  76. Screening Lengths in Ionic Fluids. F Coupette, AA Lee and A Härtel, Phys. Rev. Lett. 121 075501 (2018)
  77. Welcoming Gallium- and Indium-Fumarate MOFs to the Family: Synthesis, Comprehensive Characterization, Observation of Porous Hydrophobicity, and CO2 Dynamics. Y Zhang, BEG Lucier, SM McKenzie, M Arhangelskis, AJ Morris, T Friščić, JW Reid, VV Terskikh, M Chen and Y Huang, ACS Applied Materials and Interfaces 10 28582 - 28596 (2018)
  78. Topology of one dimensional quantum systems out of equilibrium M McGinley and NR Cooper, Phys. Rev. Lett. 121 090401 (2018)
  79. Nonreciprocal Reconfigurable Microwave Optomechanical Circuit NR Bernier, LD Toth, A Koottandavida, M Ioannou, D Malz, A Nunnenkamp, AK Feofanov and TJ Kippenberg, Int. Conf. Optical MEMS and Nanophot. 2018-July (2018)
  80. Quantum Motional Sideband Asymmetry in the Presence of Kerr-Type Nonlinearities L Qiu, I Shomroni, M Ioannou, D Malz, A Nunnenkamp and TJ Kippenberg, Int. Conf. Optical MEMS and Nanophot. 2018-July (2018)
  81. Core Electrons in the Electronic Stopping of Heavy Ions R Ullah, E Artacho and AA Correa, Phys. Rev. Lett. 121 116401 (2018)
  82. Band structure interpolation using optimized local orbitals from linear-scaling density functional theory LE Ratcliff, GJ Conduit, NDM Hine and PD Haynes, Phys. Rev. B 98 125123 (2018)
  83. Time-Dependent Density-Functional Theory for Modeling Solid-State Fluorescence Emission of Organic Multicomponent Crystals. M Arhangelskis, DB Jochym, L Bernasconi, T Friščić, AJ Morris and W Jones, J. Phys. Chem. A 122 7514 - 7521 (2018)
  84. Assimilating Radial Distribution Functions To Build Water Models with Improved Structural Properties. AD Wade, L-P Wang and DJ Huggins, J. Chem. Inf. Model. 58 1766 - 1778 (2018)
  85. Meniscus instabilities in thin elastic layers. JS Biggins and L Mahadevan, Soft Matter 14 7680 - 7689 (2018)
  86. High-pressure vibrational properties of dense rubidium M Santoro, D Colognesi, B Monserrat, E Gregoryanz, L Ulivi and FA Gorelli, Phys. Rev. B 98 (2018)
  87. Unified Thermodynamic Uncertainty Relations in Linear Response. K Macieszczak, K Brandner and JP Garrahan, Phys. Rev. Lett. 121 130601 (2018)
  88. Dynamics of a lattice gauge theory with fermionic matter-minimal quantum simulator with time-dependent impurities in ultracold gases A Smith, DL Kovrizhin, R Moessner and J Knolle, Quantum Sci. and Tech. 3 UNSP 044003 (2018)
  89. Mechanics of mouse blastocyst hatching revealed by a hydrogel-based microdeformation assay K Leonavicius, C Royer, C Preece, B Davies, JS Biggins and S Srinivas, P. Natl Acad. Sci. USA 115 10375 - 10380 (2018)
  90. Optical absorption driven by dynamical symmetry breaking in indium oxide AJ Morris and B Monserrat, Phys. Rev. B 98 161203 (2018)
  91. Neurogenin3 phosphorylation controls reprogramming efficiency of pancreatic ductal organoids into endocrine cells. R Azzarelli et al., Scientific Reports 8 15374 (2018)
  92. Generalized convex hull construction for materials discovery A Anelli, EA Engel, CJ Pickard and M Ceriotti, Phys. Rev. Mat. 2 103804 (2018)
  93. Towards the systematic crystallisation of molecular ionic cocrystals: insights from computed crystal form landscapes. S Mohamed, AA Alwan, T Friščić, AJ Morris and M Arhangelskis, Faraday Disc. 211 401 - 424 (2018)
  94. Supercooling and fragile glassiness in a dipolar kagome Ising magnet J Hamp, R Moessner and C Castelnovo, Phys. Rev. B 98 144439 (2018)
  95. Direct Bandgap Behavior in Rashba-Type Metal Halide Perovskites. JM Richter, K Chen, A Sadhanala, J Butkus, JPH Rivett, RH Friend, B Monserrat, JM Hodgkiss and F Deschler, Adv. Mater. e1803379 (2018)
  96. Defect identification based on first-principles calculations for deep level transient spectroscopy D Wickramaratne, CE Dreyer, B Monserrat, JX Shen, JL Lyons, A Alkauskas and CG Van de Walle, Appl. Phys. Lett. 113 192106 (2018)
  97. Inverted hysteresis and negative remanence in a homogeneous antiferromagnet L Opherden, T Bilitewski, J Hornung, T Herrmannsdörfer, A Samartzis, ATMN Islam, VK Anand, B Lake, R Moessner and J Wosnitza, Phys. Rev. B 98 180403 (2018)
  98. Reply to "comment on 'High-pressure phases of group-II difluorides: Polymorphism and superionicity' " JR Nelson, RJ Needs and CJ Pickard, Phys. Rev. B 98 186102 (2018)
  99. Analysis of a capped carbon nanotube by linear-scaling density-functional theory. CJ Edgcombe, SM Masur, EB Linscott, JAJ Whaley-Baldwin and CHW Barnes, Ultramicrosopy 198 26 - 32 (2018)
  100. Extreme value statistics of mutation accumulation in renewing cell populations P Greulich and BD Simons, Phys. Rev. E 98 050401 (2018)
  101. Energy–entropy competition and the effectiveness of stochastic gradient descent in machine learning Y Zhang, AM Saxe, MS Advani and AA Lee, Mol. Phys. 116 3214 - 3223 (2018)
  102. Noisy coupled qubits: Operator spreading and the Fredrickson-Andersen model DA Rowlands and A Lamacraft, Phys. Rev. B 98 195125 (2018)
  103. Quantum oscillations and criticality in a fermionic and bosonic dimer model for the cuprates G Goldstein, C Chamon and C Castelnovo, Phys. Rev. B 98 184512 (2018)
  104. Screening cloud and non-Fermi-liquid scattering in topological Kondo devices A Latief and B Béri, Phys. Rev. B 98 205427 (2018)
  105. Excitations in the field-induced quantum spin liquid state of alpha-RuCl3 A Banerjee et al., npj Quantum Mater. 3 8 (2018)
  106. Prediction of GABARAP interaction with the GABA type A receptor. BWJ Irwin, S Vukovič, MC Payne, M ElGamacy and P-L Chau, Proteins - Structure Function and Bioinformatics 86 1251 - 1264 (2018)
  107. Statistical theory of branching morphogenesis. E Hannezo and BD Simons, Devel. Growth Differ. 60 512 - 521 (2018)
  108. Unconditional preparation of nonclassical states via linear-and-quadratic optomechanics M Brunelli, O Houhou, DW Moore, A Nunnenkamp, M Paternostro and A Ferraro, Phys. Rev. A 98 063801 (2018)
  109. Theory of mechano-chemical patterning in biphasic biological tissues: Supplementary Information P Recho, A Hallou and E Hannezo, (2018)
  110. Disordered flat bands on the kagome lattice T Bilitewski and R Moessner, Phys. Rev. B 98 235109 (2018)
  111. High-pressure CaF2 revisited: A new high-temperature phase and the role of phonons in the search for superionic conductivity JR Nelson, RJ Needs and CJ Pickard, Phys. Rev. B 98 224105 (2018)
  112. The chaperone effect in scientific publishing. V Sekara, P Deville, SE Ahnert, A-L Barabási, R Sinatra and S Lehmann, P. Natl Acad. Sci. USA 115 12603 - 12607 (2018)
  113. Temperature Dependence of the Butterfly Effect in a Classical Many-Body System T Bilitewski, S Bhattacharjee and R Moessner, Phys. Rev. Lett. 121 250602 (2018)
  114. Carbon nanotube functionalization as a route to enhancing the electrical and mechanical properties of Cu-CNT composites. KZ Milowska, M Burda, L Wolanicka, PD Bristowe and KKK Koziol, Nanoscale 11 145 - 157 (2018)
  115. Role of spin in the calculation of Hubbard U and Hund's J parameters from first principles EB Linscott, DJ Cole, MC Payne and DD O'Regan, Phys. Rev. B 98 235157 (2018)
  116. Effect of magnetism and temperature on the stability of (Cr-x, V1-x)(2)AlC phases J Grossi, SH Shah, E Artacho and PD Bristowe, Phys. Rev. Mat. 2 123603 (2018)